1 files changed, 486 insertions, 0 deletions
diff --git a/cmd/bookpipeline/main.go b/cmd/bookpipeline/main.go
new file mode 100644
index 0000000..f445547
--- /dev/null
+++ b/cmd/bookpipeline/main.go
@@ -0,0 +1,486 @@
+package main
+
+import (
+	"errors"
+	"flag"
+	"fmt"
+	"log"
+	"os"
+	"os/exec"
+	"path/filepath"
+	"regexp"
+	"strings"
+	"time"
+
+	"rescribe.xyz/bookpipeline"
+	"rescribe.xyz/go.git/lib/hocr"
+	"rescribe.xyz/go.git/preproc"
+)
+
+const usage = `Usage: bookpipeline [-v] [-np] [-nw] [-no] [-na] [-t training]
+
+Watches the preprocess, ocr and analyse queues for book names. When
+one is found this general process is followed:
+
+- The book name is hidden from the queue, and a 'heartbeat' is
+  started which keeps it hidden (this will time out after 2 minutes
+  if the program is terminated)
+- The necessary files from bookname/ are downloaded
+- The files are processed
+- The resulting files are uploaded to bookname/
+- The heartbeat is stopped
+- The book name is removed from the queue it was taken from, and
+  added to the next queue for future processing
+
+`
+
+const PauseBetweenChecks = 3 * time.Minute
+const HeartbeatTime = 60
+
+// null writer to enable non-verbose logging to be discarded
+type NullWriter bool
+
+func (w NullWriter) Write(p []byte) (n int, err error) {
+	return len(p), nil
+}
+
+type Clouder interface {
+	Init() error
+	ListObjects(bucket string, prefix string) ([]string, error)
+	Download(bucket string, key string, fn string) error
+	Upload(bucket string, key string, path string) error
+	CheckQueue(url string, timeout int64) (bookpipeline.Qmsg, error)
+	AddToQueue(url string, msg string) error
+	DelFromQueue(url string, handle string) error
+	QueueHeartbeat(msg bookpipeline.Qmsg, qurl string, duration int64) (bookpipeline.Qmsg, error)
+}
+
+type Pipeliner interface {
+	Clouder
+	PreQueueId() string
+	WipeQueueId() string
+	OCRQueueId() string
+	AnalyseQueueId() string
+	WIPStorageId() string
+	GetLogger() *log.Logger
+}
+
+func download(dl chan string, process chan string, conn Pipeliner, dir string, errc chan error, logger *log.Logger) {
+	for key := range dl {
+		fn := filepath.Join(dir, filepath.Base(key))
+		logger.Println("Downloading", key)
+		err := conn.Download(conn.WIPStorageId(), key, fn)
+		if err != nil {
+			for range dl {
+			} // consume the rest of the receiving channel so it isn't blocked
+			close(process)
+			errc <- err
+			return
+		}
+		process <- fn
+	}
+	close(process)
+}
+
+func up(c chan string, done chan bool, conn Pipeliner, bookname string, errc chan error, logger *log.Logger) {
+	for path := range c {
+		name := filepath.Base(path)
+		key := filepath.Join(bookname, name)
+		logger.Println("Uploading", key)
+		err := conn.Upload(conn.WIPStorageId(), key, path)
+		if err != nil {
+			for range c {
+			} // consume the rest of the receiving channel so it isn't blocked
+			errc <- err
+			return
+		}
+	}
+
+	done <- true
+}
+
+func preprocess(pre chan string, up chan string, errc chan error, logger *log.Logger) {
+	for path := range pre {
+		logger.Println("Preprocessing", path)
+		done, err := preproc.PreProcMulti(path, []float64{0.1, 0.2, 0.4, 0.5}, "binary", 0, true, 5, 30)
+		if err != nil {
+			for range pre {
+			} // consume the rest of the receiving channel so it isn't blocked
+			close(up)
+			errc <- err
+			return
+		}
+		for _, p := range done {
+			up <- p
+		}
+	}
+	close(up)
+}
+
+func wipe(towipe chan string, up chan string, errc chan error, logger *log.Logger) {
+	for path := range towipe {
+		logger.Println("Wiping", path)
+		s := strings.Split(path, ".")
+		base := strings.Join(s[:len(s)-1], "")
+		outpath := base + "_bin0.0.png"
+		err := preproc.WipeFile(path, outpath, 5, 0.03, 30)
+		if err != nil {
+			for range towipe {
+			} // consume the rest of the receiving channel so it isn't blocked
+			close(up)
+			errc <- err
+			return
+		}
+		up <- outpath
+	}
+	close(up)
+}
+
+func ocr(training string) func(chan string, chan string, chan error, *log.Logger) {
+	return func(toocr chan string, up chan string, errc chan error, logger *log.Logger) {
+		for path := range toocr {
+			logger.Println("OCRing", path)
+			name := strings.Replace(path, ".png", "", 1)
+			cmd := exec.Command("tesseract", "-l", training, path, name, "hocr")
+			err := cmd.Run()
+			if err != nil {
+				for range toocr {
+				} // consume the rest of the receiving channel so it isn't blocked
+				close(up)
+				errc <- errors.New(fmt.Sprintf("Error ocring %s: %s", path, err))
+				return
+			}
+			up <- name + ".hocr"
+		}
+		close(up)
+	}
+}
+
+func analyse(toanalyse chan string, up chan string, errc chan error, logger *log.Logger) {
+	confs := make(map[string][]*bookpipeline.Conf)
+	bestconfs := make(map[string]*bookpipeline.Conf)
+	savedir := ""
+
+	for path := range toanalyse {
+		if savedir == "" {
+			savedir = filepath.Dir(path)
+		}
+		logger.Println("Calculating confidence for", path)
+		avg, err := hocr.GetAvgConf(path)
+		if err != nil && err.Error() == "No words found" {
+			continue
+		}
+		if err != nil {
+			for range toanalyse {
+			} // consume the rest of the receiving channel so it isn't blocked
+			close(up)
+			errc <- errors.New(fmt.Sprintf("Error retreiving confidence for %s: %s", path, err))
+			return
+		}
+		base := filepath.Base(path)
+		codestart := strings.Index(base, "_bin")
+		name := base[0:codestart]
+		var c bookpipeline.Conf
+		c.Path = path
+		c.Code = base[codestart:]
+		c.Conf = avg
+		confs[name] = append(confs[name], &c)
+
+	}
+
+	fn := filepath.Join(savedir, "conf")
+	logger.Println("Saving confidences in file", fn)
+	f, err := os.Create(fn)
+	if err != nil {
+		close(up)
+		errc <- errors.New(fmt.Sprintf("Error creating file %s: %s", fn, err))
+		return
+	}
+	defer f.Close()
+
+	logger.Println("Finding best confidence for each page, and saving all confidences")
+	for base, conf := range confs {
+		var best float64
+		for _, c := range conf {
+			if c.Conf > best {
+				best = c.Conf
+				bestconfs[base] = c
+			}
+			_, err = fmt.Fprintf(f, "%s\t%02.f\n", c.Path, c.Conf)
+			if err != nil {
+				close(up)
+				errc <- errors.New(fmt.Sprintf("Error writing confidences file: %s", err))
+				return
+			}
+		}
+	}
+	up <- fn
+
+	logger.Println("Creating best file listing the best file for each page")
+	fn = filepath.Join(savedir, "best")
+	f, err = os.Create(fn)
+	if err != nil {
+		close(up)
+		errc <- errors.New(fmt.Sprintf("Error creating file %s: %s", fn, err))
+		return
+	}
+	defer f.Close()
+	for _, conf := range bestconfs {
+		_, err = fmt.Fprintf(f, "%s\n", filepath.Base(conf.Path))
+	}
+	up <- fn
+
+	logger.Println("Creating graph")
+	fn = filepath.Join(savedir, "graph.png")
+	f, err = os.Create(fn)
+	if err != nil {
+		close(up)
+		errc <- errors.New(fmt.Sprintf("Error creating file %s: %s", fn, err))
+		return
+	}
+	defer f.Close()
+	err = bookpipeline.Graph(bestconfs, filepath.Base(savedir), f)
+	if err != nil {
+		close(up)
+		errc <- errors.New(fmt.Sprintf("Error rendering graph: %s", err))
+		return
+	}
+	up <- fn
+
+	close(up)
+}
+
+func heartbeat(conn Pipeliner, t *time.Ticker, msg bookpipeline.Qmsg, queue string, msgc chan bookpipeline.Qmsg, errc chan error) {
+	currentmsg := msg
+	for range t.C {
+		m, err := conn.QueueHeartbeat(currentmsg, queue, HeartbeatTime*2)
+		if err != nil {
+			errc <- err
+			t.Stop()
+			return
+		}
+		if m.Id != "" {
+			conn.GetLogger().Println("Replaced message handle as visibilitytimeout limit was reached")
+			currentmsg = m
+			// TODO: maybe handle communicating new msg more gracefully than this
+			for range msgc {
+			} // throw away any old msgc
+			msgc <- m
+		}
+	}
+}
+
+func processBook(msg bookpipeline.Qmsg, conn Pipeliner, process func(chan string, chan string, chan error, *log.Logger), match *regexp.Regexp, fromQueue string, toQueue string) error {
+	dl := make(chan string)
+	msgc := make(chan bookpipeline.Qmsg)
+	processc := make(chan string)
+	upc := make(chan string)
+	done := make(chan bool)
+	errc := make(chan error)
+
+	bookname := msg.Body
+
+	d := filepath.Join(os.TempDir(), bookname)
+	err := os.MkdirAll(d, 0755)
+	if err != nil {
+		return errors.New(fmt.Sprintf("Failed to create directory %s: %s", d, err))
+	}
+
+	t := time.NewTicker(HeartbeatTime * time.Second)
+	go heartbeat(conn, t, msg, fromQueue, msgc, errc)
+
+	// these functions will do their jobs when their channels have data
+	go download(dl, processc, conn, d, errc, conn.GetLogger())
+	go process(processc, upc, errc, conn.GetLogger())
+	go up(upc, done, conn, bookname, errc, conn.GetLogger())
+
+	conn.GetLogger().Println("Getting list of objects to download")
+	objs, err := conn.ListObjects(conn.WIPStorageId(), bookname)
+	if err != nil {
+		t.Stop()
+		_ = os.RemoveAll(d)
+		return errors.New(fmt.Sprintf("Failed to get list of files for book %s: %s", bookname, err))
+	}
+	var todl []string
+	for _, n := range objs {
+		if !match.MatchString(n) {
+			conn.GetLogger().Println("Skipping item that doesn't match target", n)
+			continue
+		}
+		todl = append(todl, n)
+	}
+	for _, a := range todl {
+		dl <- a
+	}
+	close(dl)
+
+	// wait for either the done or errc channel to be sent to
+	select {
+	case err = <-errc:
+		t.Stop()
+		_ = os.RemoveAll(d)
+		return err
+	case <-done:
+	}
+
+	if toQueue != "" {
+		conn.GetLogger().Println("Sending", bookname, "to queue", toQueue)
+		err = conn.AddToQueue(toQueue, bookname)
+		if err != nil {
+			t.Stop()
+			_ = os.RemoveAll(d)
+			return errors.New(fmt.Sprintf("Error adding to queue %s: %s", bookname, err))
+		}
+	}
+
+	t.Stop()
+
+	// check whether we're using a newer msg handle
+	select {
+	case m, ok := <-msgc:
+		if ok {
+			msg = m
+			conn.GetLogger().Println("Using new message handle to delete message from old queue")
+		}
+	default:
+		conn.GetLogger().Println("Using original message handle to delete message from old queue")
+	}
+
+	conn.GetLogger().Println("Deleting original message from queue", fromQueue)
+	err = conn.DelFromQueue(fromQueue, msg.Handle)
+	if err != nil {
+		_ = os.RemoveAll(d)
+		return errors.New(fmt.Sprintf("Error deleting message from queue: %s", err))
+	}
+
+	err = os.RemoveAll(d)
+	if err != nil {
+		return errors.New(fmt.Sprintf("Failed to remove directory %s: %s", d, err))
+	}
+
+	return nil
+}
+
+func main() {
+	verbose := flag.Bool("v", false, "verbose")
+	training := flag.String("t", "rescribealphav5", "tesseract training file to use")
+	nopreproc := flag.Bool("np", false, "disable preprocessing")
+	nowipe := flag.Bool("nw", false, "disable wipeonly")
+	noocr := flag.Bool("no", false, "disable ocr")
+	noanalyse := flag.Bool("na", false, "disable analysis")
+
+	flag.Usage = func() {
+		fmt.Fprintf(flag.CommandLine.Output(), usage)
+		flag.PrintDefaults()
+	}
+	flag.Parse()
+
+	var verboselog *log.Logger
+	if *verbose {
+		verboselog = log.New(os.Stdout, "", 0)
+	} else {
+		var n NullWriter
+		verboselog = log.New(n, "", 0)
+	}
+
+	origPattern := regexp.MustCompile(`[0-9]{4}.jpg$`) // TODO: match alternative file naming
+	wipePattern := regexp.MustCompile(`[0-9]{4}.png$`)
+	preprocessedPattern := regexp.MustCompile(`_bin[0-9].[0-9].png$`)
+	ocredPattern := regexp.MustCompile(`.hocr$`)
+
+	var conn Pipeliner
+	conn = &bookpipeline.AwsConn{Region: "eu-west-2", Logger: verboselog}
+
+	verboselog.Println("Setting up AWS session")
+	err := conn.Init()
+	if err != nil {
+		log.Fatalln("Error setting up cloud connection:", err)
+	}
+	verboselog.Println("Finished setting up AWS session")
+
+	var checkPreQueue <-chan time.Time
+	var checkWipeQueue <-chan time.Time
+	var checkOCRQueue <-chan time.Time
+	var checkAnalyseQueue <-chan time.Time
+	if !*nopreproc {
+		checkPreQueue = time.After(0)
+	}
+	if !*nowipe {
+		checkWipeQueue = time.After(0)
+	}
+	if !*noocr {
+		checkOCRQueue = time.After(0)
+	}
+	if !*noanalyse {
+		checkAnalyseQueue = time.After(0)
+	}
+
+	for {
+		select {
+		case <-checkPreQueue:
+			msg, err := conn.CheckQueue(conn.PreQueueId(), HeartbeatTime*2)
+			checkPreQueue = time.After(PauseBetweenChecks)
+			if err != nil {
+				log.Println("Error checking preprocess queue", err)
+				continue
+			}
+			if msg.Handle == "" {
+				verboselog.Println("No message received on preprocess queue, sleeping")
+				continue
+			}
+			verboselog.Println("Message received on preprocess queue, processing", msg.Body)
+			err = processBook(msg, conn, preprocess, origPattern, conn.PreQueueId(), conn.OCRQueueId())
+			if err != nil {
+				log.Println("Error during preprocess", err)
+			}
+		case <-checkWipeQueue:
+			msg, err := conn.CheckQueue(conn.WipeQueueId(), HeartbeatTime*2)
+			checkWipeQueue = time.After(PauseBetweenChecks)
+			if err != nil {
+				log.Println("Error checking wipeonly queue", err)
+				continue
+			}
+			if msg.Handle == "" {
+				verboselog.Println("No message received on wipeonly queue, sleeping")
+				continue
+			}
+			verboselog.Println("Message received on wipeonly queue, processing", msg.Body)
+			err = processBook(msg, conn, wipe, wipePattern, conn.WipeQueueId(), conn.OCRQueueId())
+			if err != nil {
+				log.Println("Error during wipe", err)
+			}
+		case <-checkOCRQueue:
+			msg, err := conn.CheckQueue(conn.OCRQueueId(), HeartbeatTime*2)
+			checkOCRQueue = time.After(PauseBetweenChecks)
+			if err != nil {
+				log.Println("Error checking OCR queue", err)
+				continue
+			}
+			if msg.Handle == "" {
+				verboselog.Println("No message received on OCR queue, sleeping")
+				continue
+			}
+			verboselog.Println("Message received on OCR queue, processing", msg.Body)
+			err = processBook(msg, conn, ocr(*training), preprocessedPattern, conn.OCRQueueId(), conn.AnalyseQueueId())
+			if err != nil {
+				log.Println("Error during OCR process", err)
+			}
+		case <-checkAnalyseQueue:
+			msg, err := conn.CheckQueue(conn.AnalyseQueueId(), HeartbeatTime*2)
+			checkAnalyseQueue = time.After(PauseBetweenChecks)
+			if err != nil {
+				log.Println("Error checking analyse queue", err)
+				continue
+			}
+			if msg.Handle == "" {
+				verboselog.Println("No message received on analyse queue, sleeping")
+				continue
+			}
+			verboselog.Println("Message received on analyse queue, processing", msg.Body)
+			err = processBook(msg, conn, analyse, ocredPattern, conn.AnalyseQueueId(), "")
+			if err != nil {
+				log.Println("Error during analysis", err)
+			}
+		}
+	}
+}